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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6601450 chr8:10243101 G/T SGK223 chr8:8175258-8244008:- -0.36 -7.01 8.06E-12 Box Plot
THCA rs6601451 chr8:10243681 C/G SGK223 chr8:8175258-8244008:- 0.42 8.24 1.67E-15 Box Plot
THCA rs6601464 chr8:10318126 G/A SGK223 chr8:8175258-8244008:- -0.41 -6.54 1.58E-10 Box Plot
THCA rs6601545 chr8:10845187 G/A SGK223 chr8:8175258-8244008:- 0.39 7.02 7.8E-12 Box Plot
THCA rs6601546 chr8:10860255 A/C SGK223 chr8:8175258-8244008:- 0.38 6.91 1.58E-11 Box Plot
THCA rs6601559 chr8:10950757 C/G SGK223 chr8:8175258-8244008:- 0.48 9.15 1.6E-18 Box Plot
THCA rs6601560 chr8:10950866 T/C SGK223 chr8:8175258-8244008:- 0.48 9.17 1.46E-18 Box Plot
THCA rs6601564 chr8:10982051 A/G SGK223 chr8:8175258-8244008:- 0.53 10.27 1.74E-22 Box Plot
THCA rs6601565 chr8:11032228 T/G SGK223 chr8:8175258-8244008:- 0.51 9.73 1.54E-20 Box Plot
THCA rs6601566 chr8:11042974 G/T SGK223 chr8:8175258-8244008:- 0.48 9.1 2.5E-18 Box Plot
THCA rs6601568 chr8:11073402 G/A SGK223 chr8:8175258-8244008:- 0.52 9.8 8.67E-21 Box Plot
THCA rs6601569 chr8:11073578 C/T SGK223 chr8:8175258-8244008:- 0.52 10.33 1.01E-22 Box Plot
THCA rs6601570 chr8:11079367 G/A SGK223 chr8:8175258-8244008:- 0.54 10.57 1.35E-23 Box Plot
THCA rs6601572 chr8:11093337 C/G SGK223 chr8:8175258-8244008:- 0.32 6.37 4.56E-10 Box Plot
THCA rs6601573 chr8:11094751 A/G SGK223 chr8:8175258-8244008:- 0.33 6.5 1.99E-10 Box Plot